Empirical Inference Conference Paper 2009

Augmenting Feature-driven fMRI Analyses: Semi-supervised learning and resting state activity

Resting state activity is brain activation that arises in the absence of any task, and is usually measured in awake subjects during prolonged fMRI scanning sessions where the only instruction given is to close the eyes and do nothing. It has been recognized in recent years that resting state activity is implicated in a wide variety of brain function. While certain networks of brain areas have different levels of activation at rest and during a task, there is nevertheless significant similarity between activations in the two cases. This suggests that recordings of resting state activity can be used as a source of unlabeled data to augment discriminative regression techniques in a semi-supervised setting. We evaluate this setting empirically yielding three main results: (i) regression tends to be improved by the use of Laplacian regularization even when no additional unlabeled data are available, (ii) resting state data seem to have a similar marginal distribution to that recorded during the execution of a visual processing task implying largely similar types of activation, and (iii) this source of information can be broadly exploited to improve the robustness of empirical inference in fMRI studies, an inherently data poor domain.

Author(s): Blaschko, M. and Shelton, J. and Bartels, A.
Book Title: Advances in Neural Information Processing Systems 22
Journal: Advances in Neural Information Processing Systems 22: 23rd Annual Conference on Neural Information Processing Systems 2009
Pages: 126-134
Year: 2009
Day: 0
Editors: Bengio, Y. , D. Schuurmans, J. Lafferty, C. Williams, A. Culotta
Publisher: Curran
Bibtex Type: Conference Paper (inproceedings)
Address: Red Hook, NY, USA
Event Name: 23rd Annual Conference on Neural Information Processing Systems (NIPS 2009)
Event Place: Vancouver, BC, Canada
Digital: 0
Electronic Archiving: grant_archive
ISBN: 978-1-615-67911-9
Language: en
Organization: Max-Planck-Gesellschaft
School: Biologische Kybernetik
Links:

BibTex

@inproceedings{6064,
  title = {Augmenting Feature-driven fMRI Analyses: Semi-supervised learning and resting state activity},
  journal = {Advances in Neural Information Processing Systems 22: 23rd Annual Conference on Neural Information Processing Systems 2009},
  booktitle = {Advances in Neural Information Processing Systems 22},
  abstract = {Resting state activity is brain activation that arises in the absence of any task, and is usually measured in awake subjects during prolonged fMRI scanning sessions where the only instruction given is to close the eyes and do nothing. It has been recognized in recent years that resting state activity is implicated in a wide variety of brain function. While certain networks of brain areas have different levels
  of activation at rest and during a task, there is nevertheless significant similarity between activations in the two cases. This suggests that recordings of resting
  state activity can be used as a source of unlabeled data to augment discriminative regression techniques in a semi-supervised setting. We evaluate this setting
  empirically yielding three main results: (i) regression tends to be improved by the use of Laplacian regularization even when no additional unlabeled data are available, (ii) resting state data seem to have a similar marginal distribution to that recorded during the execution of a visual processing task implying largely similar types of activation, and (iii) this source of information can be broadly exploited to improve the robustness of empirical inference in fMRI studies, an inherently data poor domain.},
  pages = {126-134},
  editors = {Bengio, Y. , D. Schuurmans, J. Lafferty, C. Williams, A. Culotta},
  publisher = {Curran},
  organization = {Max-Planck-Gesellschaft},
  school = {Biologische Kybernetik},
  address = {Red Hook, NY, USA},
  year = {2009},
  slug = {6064},
  author = {Blaschko, M. and Shelton, J. and Bartels, A.}
}