Empirical Inference Article 2023

The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

Author(s): Schreiber*, J. and Boix*, C. and Lee, J. w. and Li, H. and Guan, Y. and Chang, C.-C. and Chang, J.-C. and Hawkins-Hooker, A. and Schölkopf, B. and Schweikert, G. and Carulla, M. R. and Canakoglu, A. and Guzzo, F. and Nanni, L. and Masseroli, M. and Carman, M. J. and Pinoli, P. and Hong, C. and Yip, K. Y. and Spence, J. P. and Batra, S. S. and Song, Y. S. and Mahony, S. and Zhang, Z. and Tan, W. and Shen, Y. and Sun, Y. and Shi, M. and Adrian, J. and Sandstrom, R. and Farrell, N. and Halow, J. and Lee, K. and Jiang, L. and Yang, X. and Epstein, C. and Strattan, J. S. and Bernstein, B. and Snyder, M. and Kellis, M. and Stafford, W. and Kundaje, A. and ENCODE Imputation Challenge Participants,
Journal: Genome Biology
Volume: 24
Year: 2023
Month: April
Bibtex Type: Article (article)
DOI: 10.1186/s13059-023-02915-y
State: Published
Article Number: 79
Electronic Archiving: grant_archive
Note: *co‑first authors

BibTex

@article{Schreiberetal23,
  title = {The {ENCODE} Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles},
  journal = {Genome Biology},
  volume = {24},
  month = apr,
  year = {2023},
  note = {*co‑first authors},
  slug = {schreiberetal23},
  author = {Schreiber*, J. and Boix*, C. and Lee, J. w. and Li, H. and Guan, Y. and Chang, C.-C. and Chang, J.-C. and Hawkins-Hooker, A. and Sch{\"o}lkopf, B. and Schweikert, G. and Carulla, M. R. and Canakoglu, A. and Guzzo, F. and Nanni, L. and Masseroli, M. and Carman, M. J. and Pinoli, P. and Hong, C. and Yip, K. Y. and Spence, J. P. and Batra, S. S. and Song, Y. S. and Mahony, S. and Zhang, Z. and Tan, W. and Shen, Y. and Sun, Y. and Shi, M. and Adrian, J. and Sandstrom, R. and Farrell, N. and Halow, J. and Lee, K. and Jiang, L. and Yang, X. and Epstein, C. and Strattan, J. S. and Bernstein, B. and Snyder, M. and Kellis, M. and Stafford, W. and Kundaje, A. and {ENCODE Imputation Challenge Participants}},
  month_numeric = {4}
}