My research interests are in the area of Bayesian inference and computational neuroscience. In particular, I am interested in a characterization of the relationship between sensory signals and neural responses. The methods which I think are the most promising to tackle this kind of tasks are Bayesian methods.

The applicability of Bayesian methods is often limited by the fact that they are computational prohibitive. My main focus has therefore been to alleviate this problem by developing approximate methods which are then also feasible on a much larger scale and can therefore be applied to realistically sized data.

The main advantage of a Bayesian treatment lies in the explicit representation of the involved uncertainties. Having access to this kind of knowledge enables one to perform further analysis such as experimental design or model selection.

Stimulus Response Relationship

I have analyzed the relationship between stimuli and neural responses from three different perspectives: (1) the encoding, (2) the decoding and (3) the joint occurrence perspective.

In a first project I investigated the system identification task corresponding to the encoding direction of the stimulus response relationship. I developed an approximate Bayesian inference method which is feasible for models of generalized linear type, one of the most successful and commonly used generative models. As a result, we obtained not only particular point estimates of sets of parameters, but also model based confidence intervals, which in turn we used for feature selection and estimating the functional connectivity within populations of neurons.

Second, I analyzed the relationship from a decoding point of view. Here, using the leaky integrate and fire neuron model, I obtained a simple yet accurate decoding algorithm. Again, using a Bayesian treatment, it is possible to not only decode the most likely stimulus but also assigning to each stimulus the probability that it has caused the observed neural response.

Third, merging both perspectives, I looked at the joint occurrence of stimuli and neural responses. Using commonly used descriptive statistics such as spike-triggered average and spike-triggered covariance, I build a maximum entropy model. This model can then be used as a generative model as well as a decoding model exhibiting the same descriptive statistics as the observed ones, while assuming the least  additional constrains due to the maximum entropy property.